Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTATAATGTATGCTTTGCTGAAACCTCAAGAGTGCTGTAAGGTA
((((((((((((.(((((((..&))))))).)))))))).........................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015458
GeneSymbolMTMR9
Binding site6676,6722
Score0.846
Seed1
Au0.574
Energy-18.4
Binding len46
Me-5.227
Phylopstem1.6539356675675672
Phylopflank0.83770030675
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end6
Position3UTR
2D Structure