Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTGCTGAAGCCAACAACTTAGCAGCTGCAGC
((((((((((((((((..(((&.))).))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015459
GeneSymbolATL3
Binding site1076,1111
Score0.923
Seed1
Au0.529
Energy-26.0
Binding len24
Me-3.938
Phylopstem-0.7952359833333333
Phylopflank0.10183251750000002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure