Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTCAACAGCTGCAGCTCTTCACAGAATACGGTCGTCTGGCAAT
(((((((((((((((((((((&)))))..))))))))))))......................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015459
GeneSymbolATL3
Binding site585,631
Score1.0
Seed1
Au0.544
Energy-21.7
Binding len46
Me-3.938
Phylopstem0.3917067244444444
Phylopflank0.007859294999999974
Longest consecutive pairings12
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure