Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCAGCAGAACCACCCCCTTGCCTGCGCCGAGGCGCCGCAGCTGCAGA
((((((((((((.(((..(((&.)))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015466
GeneSymbolPTPN23
Binding site3378,3429
Score0.923
Seed1
Au0.265
Energy-29.7
Binding len23
Me-5.227
Phylopstem0.053305833333333406
Phylopflank0.9679229025
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure