Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACATTGTATTTAGATCAACTATGGGTTTATATAAATGCCAA
...(((((((((((((((((..&))))))))))))...........................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015473
GeneSymbolHEATR5A
Binding site7364,7409
Score0.846
Seed0
Au0.721
Energy-18.7
Binding len45
Me-6.515
Phylopstem4.050988111363637
Phylopflank4.46680998875
Longest consecutive pairings12
Position of longest consecutive pairings33
Pairings in 3prime end6
Position3UTR
2D Structure