Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACCAGAGCTGCAGA
((((((((..((((((.....&))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015474
GeneSymbolSAMHD1
Binding site619,636
Score1.0
Seed1
Au0.544
Energy-22.1
Binding len17
Me-6.236
Phylopstem-0.1718091875
Phylopflank0.5713504275000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure