Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGTTACATGTAACGCAGCTGTAC
.((((((((((..(((((.(.&).))))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015474
GeneSymbolSAMHD1
Binding site4012,4035
Score1.0
Seed1
Au0.676
Energy-21.5
Binding len23
Me-8.429
Phylopstem3.4299115000000002
Phylopflank3.8243502875000006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure