Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTTCAACTGGGTAAGGGAAACAGCTGCAAT
(((((((((((((((...(((&)))....))))))...........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015474
GeneSymbolSAMHD1
Binding site4598,4632
Score1.0
Seed1
Au0.554
Energy-21.1
Binding len34
Me-4.171
Phylopstem0.2118741853846154
Phylopflank0.49218418461111113
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure