Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACATTTTGCTAGAGCTCAAG
(((.((((..(((((((((((&))))))))....)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015475
GeneSymbolFAM98A
Binding site1644,1669
Score0.846
Seed0
Au0.618
Energy-17.8
Binding len25
Me-9.268
Phylopstem3.8377494533333327
Phylopflank3.1459832837499997
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure