Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTCCGAGTTCCCCAAGGGCATCATTGTGCATACCATGGCTGCAGT
(((((((((.(((((((....&.)))).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354159
GeneSymbolACSL3
Binding site989,1039
Score0.923
Seed1
Au0.382
Energy-19.5
Binding len20
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure