Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCGGCGGTAGA
((((.(((((((((((.....&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015477
GeneSymbolSIN3A
Binding site9,26
Score0.846
Seed0
Au0.345
Energy-22.9
Binding len17
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure