Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAAAGCTGAAGCTGGAAC
((.(((((.((((((((((((&))))))))..)))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015477
GeneSymbolSIN3A
Binding site4374,4398
Score0.923
Seed0
Au0.574
Energy-22.5
Binding len24
Me-6.552
Phylopstem5.192209571428571
Phylopflank5.588833669999999
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure