Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCACAATTGCAGATTTGAGCACAATGTCTGCAGA
((((((((((((((((..(((&)))..))))))))))...............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015483
GeneSymbolKBTBD2
Binding site300,337
Score0.846
Seed1
Au0.588
Energy-19.9
Binding len37
Me-3.938
Phylopstem4.806470322580645
Phylopflank2.8666977124999997
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end6
Position5UTR
2D Structure