Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCATGATACCTATGAGACCAACACACCCAGCTGCT
..(((((((.((((((..(((&.))).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354169
GeneSymbolKCNJ5
Binding site1512,1552
Score0.923
Seed1
Au0.471
Energy-21.1
Binding len20
Me-6.2
Phylopstem3.317058
Phylopflank3.809358555000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure