Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTTCAGCCTGGCACTGCCCAGCCCTCCAGCCGTAGCTGTG
..(((((((((((((...(((&.)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015492
GeneSymbolC15orf39
Binding site2331,2376
Score0.923
Seed1
Au0.309
Energy-26.4
Binding len21
Me-5.19
Phylopstem0.3153716615384616
Phylopflank0.14524024500000005
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure