Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACTGTCGTTTTTCAGTGCGGGACCGGCAACCGTAGCTGCT
..((((((((((((((..(((&.))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015497
GeneSymbolTMEM87A
Binding site100,143
Score1.0
Seed1
Au0.412
Energy-30.6
Binding len20
Me-4.957
Phylopstem2.5751169999999997
Phylopflank1.3784082500000001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure