Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAAGTGGCGGCAGCAGCAGCCGCAGCAGCC
..((.(((((((((((.....&.))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015503
GeneSymbolSH2B1
Binding site4340,4374
Score0.846
Seed0
Au0.368
Energy-24.1
Binding len16
Me-9.076
Phylopstem1.1029647272727272
Phylopflank1.4926187850000003
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end3
Position3UTR
2D Structure