Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTGGCATGAAATGGCCAACTGTGGCTGTT
..(((((((((((((......&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015508
GeneSymbolTIPARP
Binding site3633,3666
Score1.0
Seed1
Au0.618
Energy-20.0
Binding len15
Me-5.19
Phylopstem1.6560283076923075
Phylopflank1.2574948312499998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure