Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAGCTCCATCTGGTTGCTGCAT
.((((((.((((((((((((.&)))))))))).......)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015509
GeneSymbolNECAP1
Binding site1634,1661
Score0.923
Seed1
Au0.603
Energy-21.0
Binding len27
Me-6.107
Phylopstem0.49376239473684214
Phylopflank0.5870247500000001
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure