Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGGTTTTCTTTTCCTCTGCCTGCAGCATTGCC
..(((((((((((((((((((&))))))))).................)))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015511
GeneSymbolAAR2
Binding site1331,1370
Score0.846
Seed1
Au0.5
Energy-21.6
Binding len39
Me-4.957
Phylopstem4.671784445789473
Phylopflank3.9603942125
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end8
PositionCDS
2D Structure