Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACCCGGCGTGCCAGGA
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015526
GeneSymbolCLIP3
Binding site398,414
Score0.846
Seed1
Au0.441
Energy-15.0
Binding len10
Me-14.322
Phylopstem0.1576259875
Phylopflank0.15668656875000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure