Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTTGCGCCTGGGAGACCGCGTGCTGCT
..((((((((((((...((((&.))))....))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015526
GeneSymbolCLIP3
Binding site1084,1113
Score0.846
Seed1
Au0.324
Energy-26.0
Binding len23
Me-5.925
Phylopstem0.40317622307692313
Phylopflank0.456991095
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure