Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCAAGGCTGTGGCTGCC
..((((((((((((....(((&)))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015531
GeneSymbolC2CD3
Binding site4440,4460
Score1.0
Seed1
Au0.397
Energy-21.5
Binding len20
Me-5.925
Phylopstem2.3636549833333333
Phylopflank1.5971706412500004
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure