Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGATGACATCACAGCAGCTCGGCTTCTACCACTTCACCATATGCCCACGCAGCTGCT
..(((((((((...(((.(((&.)))...)))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015532
GeneSymbolPOLR2M
Binding site979,1040
Score0.923
Seed1
Au0.485
Energy-22.9
Binding len23
Me-10.45
Phylopstem4.249144877777777
Phylopflank2.3185048137499997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure