Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAATTACCAACAGTGAAGCACTACAGGAGGCAACTGTGGCATTGCT
..((((((((((((((.....&.)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015534
GeneSymbolZZZ3
Binding site3761,3810
Score1.0
Seed1
Au0.515
Energy-18.8
Binding len18
Me-4.957
Phylopstem4.9109931875
Phylopflank5.404510749999999
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure