Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGTGCCAGC
..((((((((((..........&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015540
GeneSymbolRPAP1
Binding site2692,2703
Score0.923
Seed1
Au0.353
Energy-16.6
Binding len11
Me-8.071
Phylopstem3.5170023
Phylopflank2.6502568375000006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure