Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGCCTCGGCTGCGC
.((((((((.(((.((.((((&)))))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015540
GeneSymbolRPAP1
Binding site1742,1762
Score0.897
Seed1
Au0.338
Energy-23.8
Binding len20
Me-5.893
Phylopstem1.19784706
Phylopflank2.2621255495000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure