Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACGGAGCCGCTGCTGCC
..(((((.((((((.(.((((&))))..).)))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015540
GeneSymbolRPAP1
Binding site3387,3408
Score1.0
Seed0
Au0.353
Energy-23.9
Binding len21
Me-8.006
Phylopstem4.983418333333334
Phylopflank4.8318895925
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure