Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGCCGATGCTGCAAT
(((((((..((((...(((((&))))).))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015542
GeneSymbolUPF2
Binding site5132,5152
Score0.923
Seed1
Au0.6
Energy-21.1
Binding len20
Me-9.133
Phylopstem2.7293414285714284
Phylopflank2.5808099249999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure