Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCACAGCGCCCAGCTCCAGCAAA
(((((((((.((((((((((.&)))))))....))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015542
GeneSymbolUPF2
Binding site3774,3801
Score0.808
Seed1
Au0.412
Energy-19.5
Binding len27
Me-5.18
Phylopstem5.662743849999999
Phylopflank5.541656888750001
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure