Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCGGCAGCAAGGGCGGCGGTGGCGGCGGCGGCAGCTGCAGT
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015543
GeneSymbolRAB1A
Binding site144,188
Score1.0
Seed1
Au0.353
Energy-26.2
Binding len18
Me-6.762
Phylopstem1.2733203999999998
Phylopflank1.7444242337500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure