Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGGGCCACAGCTGCC
..(((((((.((((...((((&))))..)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015545
GeneSymbolPTCD1
Binding site3800,3819
Score0.923
Seed1
Au0.338
Energy-22.7
Binding len19
Me-7.168
Phylopstem2.1147944285714284
Phylopflank3.0801185175000003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure