Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTCCAGCCGGGG
.((((((....(((((((....&)))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015547
GeneSymbolACOT11
Binding site4924,4941
Score0.846
Seed1
Au0.471
Energy-18.4
Binding len17
Me-11.231
Phylopstem0.13589742857142859
Phylopflank-0.13429885000000003
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure