Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTGCATGCCACGGTC
((((((((.....((((((((.&))))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015547
GeneSymbolACOT11
Binding site2451,2469
Score1.0
Seed1
Au0.559
Energy-16.9
Binding len18
Me-13.697
Phylopstem0.049265725
Phylopflank0.020928876249999995
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure