Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTAATCACAGCTGCT
..(((((((.(((((..((((&)))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015547
GeneSymbolACOT11
Binding site4836,4855
Score0.923
Seed1
Au0.426
Energy-22.3
Binding len19
Me-6.433
Phylopstem-0.07816542857142858
Phylopflank0.11164095
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure