Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACACCAACCAACGTGGTGAGCTGAGCGTCGGGCAGCTGCT
..((((((((...(((..(((&.)))..)))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015547
GeneSymbolACOT11
Binding site248,291
Score0.846
Seed1
Au0.397
Energy-21.1
Binding len22
Me-12.418
Phylopstem2.601932875
Phylopflank5.075135557499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure