Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAAAGTTTAACATGAACTAACATTTCTGCACTGTAACGTGCCGGGC
.(((((((((((.((((((...&.)))))).)))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015548
GeneSymbolDST
Binding site15827,15874
Score0.923
Seed1
Au0.574
Energy-22.6
Binding len23
Me-5.082
Phylopstem2.964045657142857
Phylopflank2.8391845124999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure