Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGCTATGGAATTAATTTTTTTTCCCCAGGG
.(((((((((((((((((....&)))))))).)))).................))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015548
GeneSymbolDST
Binding site16379,16415
Score0.923
Seed1
Au0.706
Energy-18.6
Binding len36
Me-3.793
Phylopstem3.2346382971428578
Phylopflank3.488501397500001
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end4
Position3UTR
2D Structure