Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCGAGCAGCCCAGCTGCAGG
(((((((((.((((((..(.(&).)..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015548
GeneSymbolDST
Binding site9009,9030
Score1.0
Seed1
Au0.397
Energy-24.8
Binding len21
Me-5.18
Phylopstem2.770496555555555
Phylopflank2.6365500625000005
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure