Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGCAAGGCGGCTGCAC
.(((((((((..(((((((.(&).))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015548
GeneSymbolDST
Binding site10020,10040
Score0.923
Seed1
Au0.397
Energy-24.6
Binding len20
Me-9.965
Phylopstem4.6812776666666664
Phylopflank3.8706723999999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure