Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACTGGAGGCTGCT
..((((((.(((((((.((((&)))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015551
GeneSymbolSUSD5
Binding site164,184
Score0.981
Seed1
Au0.397
Energy-24.1
Binding len20
Me-6.013
Phylopstem-0.3084843
Phylopflank0.19423439000000003
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure