Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTATTTTGCAGCTGA
...(((((((((....(((((&))))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015553
GeneSymbolIPCEF1
Binding site541,561
Score0.923
Seed0
Au0.574
Energy-19.1
Binding len20
Me-9.629
Phylopstem0.09270666666666666
Phylopflank0.1630869075
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure