Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGTTTGCAACACCAGCCTGTAGA
(((((((((..((((((((.(&).))))))))..)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015553
GeneSymbolIPCEF1
Binding site3638,3661
Score0.923
Seed1
Au0.603
Energy-19.3
Binding len23
Me-8.005
Phylopstem0.29097322000000003
Phylopflank0.5241450312500001
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure