Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGTGAAGGAGCTACAGCTGGAGCTGTAC
.(((((((.((((((((....&.)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015557
GeneSymbolCHD5
Binding site1868,1900
Score0.885
Seed1
Au0.471
Energy-23.4
Binding len18
Me-4.85
Phylopstem-0.315535
Phylopflank-0.7042709375
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure