Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGGCCGCGGCTCTGTGCC
..(((((((((((((..((((&)))))))))))))))....)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015560
GeneSymbolOPA1
Binding site34,56
Score0.846
Seed1
Au0.309
Energy-22.6
Binding len22
Me-5.19
Phylopstem1.0250712470588237
Phylopflank1.1194021032142856
Longest consecutive pairings15
Position of longest consecutive pairings7
Pairings in 3prime end6
Position5UTR
2D Structure