Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATAGATGCAAGTGAAGACAGCCAGCTAGAAGCTGCC
..(((((((((((((((((((&)))))................)))))).))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015562
GeneSymbolUBXN7
Binding site866,907
Score0.846
Seed1
Au0.559
Energy-20.3
Binding len41
Me-4.957
Phylopstem0.9833508199999998
Phylopflank1.1822243549999998
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end8
PositionCDS
2D Structure