Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGTGCAAGTGTCAGCAGCTGCC
..(((((((((.(((((..((&))..))))).)....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015564
GeneSymbolLRRTM2
Binding site1929,1953
Score0.846
Seed1
Au0.618
Energy-19.6
Binding len24
Me-8.304
Phylopstem-0.38403139999999997
Phylopflank0.538283903125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure