Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAGCAGCCACAGCAGCAGCCCCCGCCGCAGCTGCAGCTGCAGC
((((((((((((((((..(((&.))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015567
GeneSymbolSLITRK5
Binding site2647,2694
Score0.846
Seed1
Au0.265
Energy-30.7
Binding len21
Me-3.938
Phylopstem1.0120074375
Phylopflank1.7602850125000002
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure