Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAGCTGCAGCTGCT
..((((((((((((.(.....&).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015568
GeneSymbolPPP1R16B
Binding site223,238
Score1.0
Seed1
Au0.309
Energy-23.2
Binding len15
Me-5.692
Phylopstem5.684881666666668
Phylopflank4.1987361675
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure