Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAAGATGAGCTGCGAA
((((((((....(((.((((.&)))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015576
GeneSymbolERC2
Binding site1040,1060
Score0.923
Seed1
Au0.456
Energy-18.8
Binding len20
Me-12.641
Phylopstem1.26532625
Phylopflank1.4912449625000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure